SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G204000

Description hypothetical protein

Gene interval Chr12:36428558–36432835 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G03687:AT1G03687:DTW domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3412Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3412 matching features · page 195 of 342

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30615 No candidate annotation 384.6477 18.665e-11
P30623 No candidate annotation 665.7881 11.071e-11
P30643 Tetralin 132.0926 16.177e-12
P30664 No candidate annotation 1066.4217 18.021e-12
P30666 (1S-Endo)-5-(4-Chloro-3-methylphenyl)-1-((4-methylphenyl)methyl)-N-(1,3,3-trimethylbicyclo(2.2.1)hept-2-yl)-1H-pyrazole-3-carboxamide 475.2387 15.78e-12
P30687 No candidate annotation 623.7960 15.419e-12
P30689 Boivinide F 752.3613 11.159e-11
P30698 methyl 7S-acetoxy-9-oxo-10-bromo-12S-hydroxy-5Z,10Z,13Z-prostatrienoate-cyclo[8R,12] 484.1439 17.944e-13
P30741 3-(Allyloxy)estra-1,3,5(10)-triene-16beta,17beta-diol 328.2035 14.72e-11
P30744 Nifekalant 405.2011 14.731e-13