SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G202300

Description hypothetical protein

Gene interval Chr12:36275438–36276838 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3817Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3817 matching features · page 377 of 382

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54686 No candidate annotation 106.5084 11.454e-11
P54687 LysoPC(0:0/18:0) 523.3732 13.174e-12
P54719 No candidate annotation 188.9958 14.165e-17
P54736 Paliperidone Palmitate 664.4348 11.234e-12
P54745 Notoginsenoside T2 666.4304 16.005e-11
P54771 Inhibitor 50 435.0802 12.527e-18
P54772 N-(Sulfonatooxy)prop-2-enimidothioate 196.9831 12.96e-13
P54819 (2E)-2-(2-Thioxo-4-oxo-3-ethylthiazolidine-5-ylidene)-4-oxo-5-[1-[4-(2,2-diphenylvinyl)phenyl]-2,3-propanoindoline-5-ylmethylene]thiazolidine-3-acetic acid 741.1812 13.296e-11
P54823 No candidate annotation 439.0791 18.612e-12
P54841 No candidate annotation 621.2360 16.11e-14