Overview Annotation GWAS Evidence Associated genes

P54686

Metabolite ID
P54686
Deionized mass
106.5084 Da
Average m/z
107.5160
Average RT
31.1802
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.396e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.396e-11
Glyma.14G198600 hypothetical protein NA 2Chr14:46360801–46362778 (+)1.767e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)9.106e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)7.513e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)7.513e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.454e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.454e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.06e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.06e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.411e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.411e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.396e-11
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 1Chr14:46375963–46379746 (-)1.767e-12
Glyma.16G156000 hypothetical protein NA 1Chr16:31620672–31621151 (-)7.966e-12
Glyma.16G156100 hypothetical protein AT1G34420:AT1G34420:leucine-rich repeat transmembrane protein kinase family protein 1Chr16:31629372–31635425 (+)7.966e-12
Glyma.16G156200 hypothetical protein AT1G34420:AT1G34420:leucine-rich repeat transmembrane protein kinase family protein 1Chr16:31639483–31643634 (+)1.454e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)5.017e-15
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)2.51e-11