SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G202300

Description hypothetical protein

Gene interval Chr12:36275438–36276838 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3817Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3817 matching features · page 10 of 382

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01041 No candidate annotation 482.0337 11.537e-14
P01060 L-2-Amino-5-hydroxypentanoic acid 133.0715 13.41e-14
P01070 trans-3-Methylsulfonyl-2-propenol 136.0187 15.717e-12
P01075 (-)-13-beta-Hydroxystylopine 339.1100 15.934e-13
P01083 D-1-[(3-Carboxypropyl)amino]-1-deoxyfructose 265.1134 11.113e-14
P01095 Capillaridin A 352.1111 11.934e-14
P01100 2H-Pyran-2-one 96.0204 12.674e-15
P01110 (R)-11,12,13-Trinor-1(5),6,9-guaiatrien-8-one 174.1043 11.04e-13
P01111 Isochromophilone VIII 394.1550 17.95e-12
P01114 No candidate annotation 149.0104 12.754e-13