SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G197800

Description hypothetical protein

Gene interval Chr12:35892655–35896825 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features36Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

36 matching features · page 2 of 4

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P19757 2-O-Caffeoylglucarate 372.0676 17.311e-11
P22506 3,6-Dimethyl-1,4-dioxane-2,5-dione 144.0414 15.304e-11
P24884 Picroroside B 660.2022 14.407e-13
P27077 No candidate annotation 655.3826 16.221e-11
P28936 No candidate annotation 505.2470 15.749e-11
P30308 pyroglutamyl-histidyl-glycine 323.1237 15.198e-11
P30931 methyl 5S,6S-diacetoxy-9-oxo-10-chloro-12S-hydroxy-10E,14Z-prostadienoate-cyclo[8R,12S] 500.2216 17.2e-11
P32474 Thymol glucoside 312.1543 12.04e-12
P33036 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1495 12.716e-12
P33280 (-)-Morphinan 227.1650 15.41e-11