P24884
Metabolite ID
P24884
Deionized mass
660.2022 Da
Average m/z
661.2101
Average RT
14.5448
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 4 | Chr16:24626024–24635513 (+) | 2.417e-16 | |
| Glyma.05G142000 | hypothetical protein | NA | 2 | Chr05:33530449–33539474 (-) | 4.966e-14 | |
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 2 | Chr07:1697119–1698666 (+) | 8.214e-12 | |
| Glyma.08G149500 | hypothetical protein | NA | 2 | Chr08:11460264–11465243 (-) | 5.483e-14 | |
| Glyma.10G006000 | hypothetical protein | NA | 2 | Chr10:596042–600044 (-) | 3.168e-12 | |
| Glyma.12G197600 | hypothetical protein | AT4G03210:XTH9:xyloglucan endotransglucosylase/hydrolase 9 | 2 | Chr12:35879106–35881779 (+) | 4.407e-13 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 5.17e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 9.086e-13 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 2 | Chr16:30652378–30659548 (+) | 1.615e-12 | |
| Glyma.01G127400 | hypothetical protein | AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… | 1 | Chr01:43890586–43892006 (+) | 2.128e-11 | |
| Glyma.03G046200 | hypothetical protein | NA | 1 | Chr03:5895672–5899267 (+) | 1.95e-11 | |
| Glyma.03G047100 | hypothetical protein | AT3G51740:IMK2:inflorescence meristem receptor-like kinase 2 | 1 | Chr03:5986288–5990191 (+) | 4.337e-13 | |
| Glyma.05G141700 | hypothetical protein | NA | 1 | Chr05:33492470–33495095 (-) | 1.39e-12 | |
| Glyma.05G231800 | ALDH2C1 | aldehyde dehydrogenase family 2 member C1 | AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 | 1 | Chr05:40924505–40929251 (+) | 5.963e-18 |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 5.128e-17 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 6.804e-11 | |
| Glyma.06G081600 | hypothetical protein | AT5G11490:AT5G11490:adaptin family protein | 1 | Chr06:6273644–6283819 (+) | 1.867e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.43e-14 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.43e-14 | |
| Glyma.07G013400 | hypothetical protein | AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | 1 | Chr07:1028243–1033837 (-) | 6.846e-11 | |
| Glyma.07G013500 | hypothetical protein | NA | 1 | Chr07:1036819–1041984 (-) | 6.846e-11 | |
| Glyma.07G017600 | hypothetical protein | NA | 1 | Chr07:1415837–1422680 (+) | 4.313e-11 | |
| Glyma.07G021100 | hypothetical protein | NA | 1 | Chr07:1647678–1650627 (+) | 2.933e-11 | |
| Glyma.07G021600 | hypothetical protein | AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | 1 | Chr07:1673827–1680014 (-) | 2.933e-11 | |
| Glyma.07G021700 | hypothetical protein | NA | 1 | Chr07:1684537–1692320 (+) | 1.398e-11 | |
| Glyma.08G150000 | hypothetical protein | AT2G32850:AT2G32850:Protein kinase superfamily protein | 1 | Chr08:11518864–11523442 (-) | 3.124e-11 | |
| Glyma.08G150100 | hypothetical protein | AT2G44450:BGLU15:beta glucosidase 15 | 1 | Chr08:11525692–11536927 (+) | 5.508e-11 | |
| Glyma.08G150400 | hypothetical protein | NA | 1 | Chr08:11565265–11571675 (+) | 1.499e-14 | |
| Glyma.10G005000 | hypothetical protein | NA | 1 | Chr10:500812–515603 (-) | 5.666e-11 | |
| Glyma.10G005300 | hypothetical protein | AT5G46050:PTR3:peptide transporter 3 | 1 | Chr10:535249–541722 (+) | 3.168e-12 | |
| Glyma.10G005400 | hypothetical protein | AT5G46040:AT5G46040:Major facilitator superfamily protein | 1 | Chr10:545269–550554 (+) | 3.168e-12 | |
| Glyma.10G006500 | hypothetical protein | AT5G43330:c-NAD-MDH2:Lactate/malate dehydrogenase family protein | 1 | Chr10:633423–637181 (+) | 3.168e-12 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 8.652e-14 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 8.652e-14 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 8.652e-14 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 8.652e-14 | |
| Glyma.10G081200 | hypothetical protein | NA | 1 | Chr10:9600771–9603988 (-) | 2.956e-11 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 3.926e-11 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 3.926e-11 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 3.926e-11 | |
| Glyma.12G018000 | hypothetical protein | NA | 1 | Chr12:1252709–1256330 (-) | 5.817e-11 | |
| Glyma.12G196800 | hypothetical protein | AT4G15180:SDG2:SET domain protein 2 | 1 | Chr12:35784957–35801339 (+) | 4.407e-13 | |
| Glyma.12G197500 | hypothetical protein | NA | 1 | Chr12:35869162–35874097 (+) | 4.407e-13 | |
| Glyma.12G197800 | hypothetical protein | NA | 1 | Chr12:35892655–35896825 (-) | 4.407e-13 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 2.789e-13 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 2.789e-13 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 2.908e-12 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 1.023e-12 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 9.086e-13 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 3.988e-11 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 1.529e-13 | |
| Glyma.15G212800 | hypothetical protein | AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein | 1 | Chr15:33408140–33467420 (+) | 2.298e-11 | |
| Glyma.16G106300 | hypothetical protein | AT5G23900:AT5G23900:Ribosomal protein L13e family protein | 1 | Chr16:21495147–21497932 (+) | 5.747e-11 | |
| Glyma.16G111100 | hypothetical protein | NA | 1 | Chr16:24438458–24444801 (+) | 2.945e-14 | |
| Glyma.16G111400 | hypothetical protein | AT4G35510:AT4G35510:PHD finger-like protein | 1 | Chr16:24546422–24549336 (+) | 2.417e-16 | |
| Glyma.16G118200 | hypothetical protein | NA | 1 | Chr16:26337169–26338323 (+) | 3.626e-11 | |
| Glyma.16G141500 | bZIP117 | AT4G36730:GBF1:G-box binding factor 1 | 1 | Chr16:29960697–29967081 (-) | 2.241e-13 | |
| Glyma.17G167800 | hypothetical protein | AT5G67250:SKIP2:SKP1/ASK1-interacting protein 2 | 1 | Chr17:15513307–15515455 (+) | 9.604e-11 | |
| Glyma.17G169100 | hypothetical protein | AT3G50210:AT3G50210:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein__AT3G49620:DIN11:2-oxogluta… | 1 | Chr17:15650607–15655215 (-) | 5.446e-13 | |
| Glyma.17G169500 | hypothetical protein | AT3G46210:AT3G46210:Ribosomal protein S5 domain 2-like superfamily protein | 1 | Chr17:15734070–15738436 (-) | 1.307e-11 | |
| Glyma.17G169600 | hypothetical protein | NA | 1 | Chr17:15741169–15742869 (+) | 1.307e-11 | |
| Glyma.17G169700 | hypothetical protein | AT3G57870:SCE1:sumo conjugation enzyme 1 | 1 | Chr17:15823866–15827109 (+) | 7.351e-11 | |
| Glyma.17G169800 | hypothetical protein | NA | 1 | Chr17:15844408–15845650 (+) | 7.351e-11 | |
| Glyma.17G170300 | hypothetical protein | AT4G36920:AP2:Integrase-type DNA-binding superfamily protein | 1 | Chr17:15975184–15979979 (+) | 7.351e-11 | |
| Glyma.19G022500 | hypothetical protein | AT5G15230:GASA4:GAST1 protein homolog 4 | 1 | Chr19:2574642–2577346 (+) | 4.407e-13 |