SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186300

Description hypothetical protein

Gene interval Chr12:34717587–34719271 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features128Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records63

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4922.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

128 matching features · page 9 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17329 3,5,5-Trimethyl-1,2-cyclohexanedione 154.0982 11.629e-11
P17381 Hypochoeroside K 398.2268 12.197e-12
P17687 YC 170 487.1624 19.75e-11
P18268 O-Methylsakerinol A 451.2040 17.062e-11
P19107 No candidate annotation 862.2377 11.239e-11
P20138 Antibiotic KA 7367B 200.1542 14.774e-11
P20196 Quinomycin B0 1112.3986 14.543e-12
P20205 3-Oxo-alpha-ionol 9-[apiosyl-(1->6)-glucoside] 502.2405 17.219e-11
P20360 Upunaphenol N 934.2782 13.061e-11
P20409 No candidate annotation 515.1913 11.82e-11