Overview Annotation GWAS Evidence Associated genes

P20205

Metabolite ID
P20205
Deionized mass
502.2405 Da
Average m/z
503.2461
Average RT
13.2439
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)2.352e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.352e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)2.837e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)7.627e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)7.627e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.325e-13
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)2.701e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.901e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.901e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)8.137e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.07e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.982e-15
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)5.566e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)7.351e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)8.678e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)7.782e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.464e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.499e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.857e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.136e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)5.383e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)4.322e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.352e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.352e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.352e-11
Glyma.08G182400 hypothetical protein NA 1Chr08:14625596–14626713 (+)1.873e-11
Glyma.08G183400 hypothetical protein NA 1Chr08:14710312–14717042 (-)9.864e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.003e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.457e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.184e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)4.895e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)8.401e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.58e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.58e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.918e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.918e-13
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.554e-11
Glyma.12G186300 hypothetical protein NA 1Chr12:34717587–34719271 (+)7.219e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.313e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.313e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.498e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.348e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.29e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.29e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.837e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.746e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.746e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.627e-14
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)8.881e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)2.961e-12
Glyma.15G138500 hypothetical protein NA 1Chr15:11270083–11275565 (-)3.581e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.676e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.846e-17
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)9.304e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)8.668e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)3.387e-13
Glyma.18G233700 hypothetical protein AT2G45950:SK20:SKP1-like 20 1Chr18:52230225–52239858 (-)1.052e-13
Glyma.18G233800 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 1Chr18:52242918–52244877 (+)1.052e-13
Glyma.18G234000 hypothetical protein AT4G29910:ORC5:origin recognition complex protein 5 1Chr18:52246538–52249964 (-)1.052e-13
Glyma.18G234200 hypothetical protein AT2G45990:AT2G45990:ribosomal RNA small subunit methyltransferase G 1Chr18:52261570–52265243 (+)1.052e-13
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)6.176e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.96e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.843e-11
Glyma.20G114000 hypothetical protein NA 1Chr20:35578719–35584659 (-)3.234e-11
Glyma.20G114400 hypothetical protein AT1G68585:AT1G68585:uncharacterized protein 1Chr20:35614355–35616709 (-)9.332e-11