SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186300

Description hypothetical protein

Gene interval Chr12:34717587–34719271 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features128Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records63

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4922.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

128 matching features · page 4 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24426 Hept-4-enedioylcarnitine 301.1540 25.043e-12
P25796 11-Hydroxy-9-tridecenoic acid 228.1698 24.075e-12
P25817 Globuloside A 890.2955 24.271e-11
P26288 N,O,O-Trimethylstephavanine 539.2216 23.277e-12
P26580 No candidate annotation 475.6741 23.458e-11
P26981 Leandreanin B 774.2748 23.349e-11
P29338 Gliadins 631.2841 27.455e-12
P30308 pyroglutamyl-histidyl-glycine 323.1237 23.46e-11
P30850 No candidate annotation 387.7083 21.25e-11
P30934 Alloeremophilone 218.1664 21.152e-13