SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186300

Description hypothetical protein

Gene interval Chr12:34717587–34719271 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features128Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records63

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4922.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

128 matching features · page 12 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37174 1,10-Epoxy-aristolane 220.1816 14.833e-11
P37209 2,3-di-O-hexanoyl-alpha-glucopyranose 376.2115 16.217e-11
P37255 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3399 17.101e-11
P38229 No candidate annotation 711.8357 13.337e-11
P38567 LysoPE(18:4(6Z,9Z,12Z,15Z)/0:0) 473.2503 12.052e-11
P39954 No candidate annotation 852.2852 13.845e-11
P40897 Folisine 275.1196 11.878e-12
P41007 Loperamide oxide 492.2170 16.416e-11
P41346 4-Vinylcyclohexene 108.0933 13.906e-11
P42503 No candidate annotation 121.9563 18.715e-11