SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186200

Description hypothetical protein

Gene interval Chr12:34708678–34710549 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G44350:NAC061:NAC domain containing protein 61

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features705Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records109

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1546.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

705 matching features · page 6 of 71

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24426 Hept-4-enedioylcarnitine 301.1540 29.072e-14
P24879 Polyarginine 486.3146 23.677e-11
P25220 methyl 5S,6S-diacetoxy-9-oxo-10-chloro-12R-hydroxy-7E,10E,14Z,17Z-prostatetraenoate-cyclo[8,12R] 496.1890 22.565e-13
P25796 11-Hydroxy-9-tridecenoic acid 228.1698 24.54e-12
P25817 Globuloside A 890.2955 27.344e-14
P25947 Dicaffeoylspermidine 469.2195 21.837e-11
P26270 Ophionin 948.2919 22.303e-13
P26580 No candidate annotation 475.6741 25.421e-13
P26981 Leandreanin B 774.2748 25.676e-14
P28722 3-tridecylphenol 276.2419 21.1e-14