SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G059300

Description hypothetical protein

Gene interval Chr12:4289989–4292215 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features91Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records39

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4286.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

91 matching features · page 7 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P25991 Kudzusaponin SA3 1090.5571 18.65e-12
P26129 Salpichrolide J 450.2430 12.058e-11
P26998 No candidate annotation 1082.9959 15.059e-11
P27130 (3E,5Z)-1,3,5-Heptatriene 94.0776 14.401e-11
P28213 4beta-(2-Aminoethylthio)epicatechin 3-gallate 517.0958 11.121e-11
P28395 No candidate annotation 708.3562 15.685e-12
P28437 Fuscinarin 264.0988 13.349e-11
P29256 Annulatophenonoside 408.1070 11.397e-11
P29897 Glutamylglycine 204.0751 14.624e-11
P30709 Phenelfamycin A 937.4701 14.327e-11