SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G059300

Description hypothetical protein

Gene interval Chr12:4289989–4292215 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features91Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records39

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4286.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

91 matching features · page 2 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17048 No candidate annotation 761.2212 26.682e-13
P17541 17-Ethynyl-16-fluoroestradiol 314.1689 27.227e-11
P22403 Sinapoyl aldehyde 208.0716 22.823e-12
P23135 Ipomoeassin A 802.3715 21.456e-13
P25100 No candidate annotation 762.2022 25.007e-12
P25767 4'-Oxonebramine 304.1750 23.536e-12
P27893 Lucyoside J 810.4380 22.546e-11
P29880 Mukurozioside IIa 1148.5482 29.978e-12
P29881 No candidate annotation 1149.0503 27.951e-12
P30940 Leukotriene E3 441.2542 22.263e-11