SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G049300

Description hypothetical protein

Gene interval Chr12:3538428–3539170 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features946Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

946 matching features · page 76 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P38360 No candidate annotation 930.4185 19.771e-14
P38388 2,2'-Azobis(2-amidinopropane) 198.1599 12.865e-13
P38406 Celapanigine 579.2456 11.891e-11
P38407 Orthosiphol U 614.2717 14.547e-12
P38507 Carolenalin 4-O-beta-D-glucoside 428.2041 14.864e-12
P38529 Sagopilone 543.2657 11.68e-11
P38580 Khivorin 586.2763 12.946e-12
P38630 No candidate annotation 541.7159 12.89e-11
P38710 Indigoidine 248.0520 11.449e-12
P38711 {1-[2-(4-Carbamimidoyl-benzoylamino)-propionyl]-piperidin-4-yloxy}-acetic acid 376.1719 16.077e-12