Overview Annotation GWAS Evidence Associated genes

P38710

Metabolite ID
P38710
Deionized mass
248.0520 Da
Average m/z
249.0590
Average RT
19.1639
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
30
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

30 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.443e-13
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)6.451e-11
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)1.872e-12
Glyma.04G192000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 1Chr04:46279239–46297477 (-)6.305e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)3.157e-11
Glyma.09G050900 hypothetical protein AT4G20050:QRT3:Pectin lyase-like superfamily protein 1Chr09:4447546–4450090 (+)3.703e-11
Glyma.09G099500 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein 1Chr09:18099034–18105167 (+)5.159e-11
Glyma.09G099600 hypothetical protein NA 1Chr09:18100113–18100745 (+)5.159e-11
Glyma.09G099800 hypothetical protein NA 1Chr09:18134075–18134470 (-)5.159e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.195e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)2.195e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)9.163e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.047e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.449e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.698e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.709e-14
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)9.247e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.443e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.813e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.37e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)3.965e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.069e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.228e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.228e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)7.339e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.771e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.069e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.069e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.636e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.636e-11