SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G049300

Description hypothetical protein

Gene interval Chr12:3538428–3539170 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features946Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

946 matching features · page 58 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28691 No candidate annotation 394.6981 14.882e-12
P28725 Heme O 838.3641 12.282e-11
P28887 No candidate annotation 267.1528 16.083e-11
P28898 (5E,7E)-(1S,3S)-4,4-difluoro-9,10-seco-5,7,10(19)-cholestatriene-1,3,25-triol 452.3112 19.925e-15
P28922 1-hexadecanoyl-2-(5-oxo-valeroyl)-sn-glycero-3-phospho-(1'-myo-inositol) 670.3308 11.863e-12
P29004 Huperzine D 286.1670 14.514e-11
P29022 Oclacitinib 337.1559 19.636e-13
P29092 No candidate annotation 104.0247 15.591e-12
P29159 No candidate annotation 386.7034 11.434e-12
P29182 5-(1H-Indol-3-ylmethyl)-3-methyl-2-thioxo-4-Imidazolidinone 259.0738 17.819e-11