Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P28691

Metabolite ID
P28691
Deionized mass
394.6981 Da
Average m/z
395.7062
Average RT
15.5616
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
27
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

27 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G180900 hypothetical protein NA 2Chr04:44665725–44672557 (-)3.057e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 2Chr12:3949453–3957386 (-)2.387e-12
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)6.573e-11
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)1.77e-11
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)1.77e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)1.382e-11
Glyma.04G182500 hypothetical protein NA 1Chr04:44860313–44864603 (-)2.7e-11
Glyma.04G183500 hypothetical protein NA 1Chr04:45150392–45155226 (+)3.404e-11
Glyma.04G188900 hypothetical protein NA 1Chr04:45982982–45986148 (+)5.48e-11
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)4.795e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.266e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.148e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.153e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.409e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.203e-18
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.416e-12
Glyma.09G187600 hypothetical protein AT5G19460:NUDT20:nudix hydrolase homolog 20 1Chr09:41213588–41217191 (+)6.969e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.811e-11
Glyma.10G137800 hypothetical protein AT4G01800:AGY1:Albino or Glassy Yellow 1 1Chr10:37158326–37170155 (+)6.1e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)8.984e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.882e-12
Glyma.17G049700 hypothetical protein AT5G35570:AT5G35570:O-fucosyltransferase family protein 1Chr17:3775263–3781370 (+)1.635e-11
Glyma.18G220200 hypothetical protein AT2G38650:GAUT7:galacturonosyltransferase 7 1Chr18:50714270–50723555 (-)7.44e-11
Glyma.18G220300 hypothetical protein NA 1Chr18:50719690–50720509 (-)7.44e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.348e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.348e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.994e-11