SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G049300

Description hypothetical protein

Gene interval Chr12:3538428–3539170 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features946Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

946 matching features · page 17 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09063 Chlovalicin 332.1372 13.453e-13
P09071 No candidate annotation 888.1557 17.49e-16
P09080 Paeonilactone A 198.0872 12.67e-16
P09142 Olanzapine 312.1400 14.527e-12
P09143 N-Butyryl-L-homoserine lactone 171.0909 18.972e-12
P09166 Tryptophyl-Serine 291.1229 14.435e-13
P09175 N-((6-Methyl-5-oxo-3-thiomorpholinyl)carbonyl)-L-histidyl-L-proline 409.1415 11.533e-13
P09221 No candidate annotation 125.0522 11.829e-11
P09291 Jasminoside A 330.1678 19.323e-11
P09297 Trichodenone A 124.0504 12.469e-11