Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P09291

Metabolite ID
P09291
Deionized mass
330.1678 Da
Average m/z
331.1760
Average RT
10.0980
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
78
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

78 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.662e-14
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)9.654e-13
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)9.655e-13
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)9.655e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.718e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.288e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.288e-14
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)6.083e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)5.928e-12
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)6.838e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.25e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.25e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)1.001e-11
Glyma.02G081600 hypothetical protein NA 1Chr02:7054190–7055955 (-)9.785e-12
Glyma.02G081900 hypothetical protein AT1G43650:UMAMIT22:nodulin MtN21 /EamA-like transporter family protein 1Chr02:7075646–7080163 (-)2.349e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)9.77e-14
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)6.627e-11
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)2.269e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)6.103e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)6.103e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)6.103e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.59e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.044e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.993e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.47e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.802e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.802e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.455e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.033e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.033e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.033e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.868e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.475e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.123e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.123e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.377e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.711e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.662e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.662e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.662e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.662e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.21e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)7.566e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)3.45e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)9.655e-13
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)9.655e-13
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)9.655e-13
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)3.519e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)9.655e-13
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)9.655e-13
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.743e-12
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.895e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.796e-11
Glyma.11G065000 hypothetical protein AT4G36730:GBF1:G-box binding factor 1 1Chr11:4916855–4922192 (+)7.661e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)9.323e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.631e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.008e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.558e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.558e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.288e-14
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)7.263e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.071e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)4.289e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.428e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)9.444e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.936e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.748e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)9.067e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.035e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)4.272e-12
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)2.67e-16
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.928e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.142e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)7.001e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.805e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.805e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)3.417e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.118e-12