SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G007800

Description hypothetical protein

Gene interval Chr12:572469–583974 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features99Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

99 matching features · page 9 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46139 PA(5-iso PGF2VI/18:3(9Z,12Z,15Z)) 740.4302 11.27e-11
P46154 N-decanoyl-histidine 309.2002 15.664e-12
P47122 3-[1-[3-(Dimethylamino)propyl]-5-methoxy-1H-indol-3-yl]-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione 442.2002 12.057e-11
P47150 17alpha-Methylestradiol 286.1937 18.521e-11
P47416 Levetiracetam 170.1068 15.909e-11
P48666 No candidate annotation 213.1709 13.087e-11
P48710 No candidate annotation 275.1941 19.429e-11
P49175 No candidate annotation 169.1160 14.428e-11
P50865 No candidate annotation 305.2465 13.177e-11
P50995 No candidate annotation 708.3048 16.104e-11