SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G110100

Description hypothetical protein

Gene interval Chr11:8397135–8398949 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G16510:AT2G16510:ATPase, F0/V0 complex, subunit C protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features71Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

71 matching features · page 5 of 8

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29563 Sulfocostunolide A 312.1036 13.128e-11
P29935 Acantrifoside A 942.5143 15.801e-12
P30099 Mespirenone 426.1849 18.847e-11
P30204 Theasaponin C1 1174.5741 16.841e-11
P30811 No candidate annotation 767.2566 12.341e-11
P31113 No candidate annotation 182.1378 16.245e-12
P32569 No candidate annotation 255.0595 12.923e-11
P32791 Tenuecyclamide A 460.0996 14.674e-12
P32991 Quivisianolide A 598.2398 13.67e-11
P33627 Vomifoliol 9-[glucosyl-(1->4)-xylosyl-(1->6)-glucoside] 680.2888 16.347e-11