SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G064300

Description hypothetical protein

Gene interval Chr11:4849799–4851673 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G36780:BEH2:BES1/BZR1 homolog 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1116Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0036.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1116 matching features · page 9 of 112

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04483 Malvidin 3-O-glucoside 493.1281 13.632e-11
P04657 Isopongaflavone 334.1227 13.237e-11
P04761 Rigosertib 451.1269 11.794e-12
P04765 2-Hexylbenzothiazole 219.1078 12.316e-11
P04959 Tetradenolide 214.1201 12.501e-14
P04966 Dihydroxytryptamine 192.0882 15.808e-11
P04985 No candidate annotation 322.6856 15.113e-16
P05028 dTDP-2,3,6-trideoxy-3-C-methyl-4-O-methyl-3-nitroso-beta-L-arabino-hexopyranose 573.1149 11.307e-12
P05107 Pyrimido[5,4-d]pyrimidine 132.0448 12.677e-11
P05139 No candidate annotation 310.6259 13.412e-11