P04959
Metabolite ID
P04959
Deionized mass
214.1201 Da
Average m/z
215.1280
Average RT
8.4899
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.08G300400 | hypothetical protein | AT2G02910:AT2G02910:transmembrane protein (DUF616) | 3 | Chr08:41830891–41843406 (-) | 7.3e-11 | |
| Glyma.03G242800 | hypothetical protein | AT4G08630:AT4G08630:fas-binding factor-like protein | 2 | Chr03:44064511–44073939 (+) | 1.913e-12 | |
| Glyma.14G171400 | hypothetical protein | NA | 2 | Chr14:42398866–42404627 (+) | 7.492e-11 | |
| Glyma.15G263500 | hypothetical protein | AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 | 2 | Chr15:49664672–49682418 (+) | 6.766e-12 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 2 | Chr16:26324650–26336836 (+) | 3.416e-12 | |
| Glyma.01G021600 | hypothetical protein | AT5G65540:AT5G65540:transcription initiation factor TFIID subunit | 1 | Chr01:2189923–2194362 (-) | 1.619e-11 | |
| Glyma.02G294000 | hypothetical protein | NA | 1 | Chr02:47237993–47240495 (+) | 6.125e-12 | |
| Glyma.02G294200 | hypothetical protein | AT3G20290:EHD1:EPS15 homology domain 1 | 1 | Chr02:47256480–47263517 (+) | 2.399e-12 | |
| Glyma.02G294500 | hypothetical protein | AT5G50850:MAB1:Transketolase family protein | 1 | Chr02:47272683–47277831 (-) | 8.076e-12 | |
| Glyma.02G294900 | hypothetical protein | AT5G55220:AT5G55220:trigger factor type chaperone family protein | 1 | Chr02:47300149–47306133 (+) | 1.887e-12 | |
| Glyma.02G295000 | hypothetical protein | AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein | 1 | Chr02:47306160–47312036 (-) | 1.887e-12 | |
| Glyma.02G295900 | hypothetical protein | NA | 1 | Chr02:47375932–47378006 (+) | 5.208e-11 | |
| Glyma.02G296200 | hypothetical protein | AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 | 1 | Chr02:47383044–47395946 (-) | 5.208e-11 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 1 | Chr03:5113019–5121557 (+) | 3.242e-11 | |
| Glyma.03G124500 | hypothetical protein | NA | 1 | Chr03:33758928–33762195 (+) | 4.818e-11 | |
| Glyma.04G116900 | hypothetical protein | NA | 1 | Chr04:13696275–13700803 (+) | 6.454e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 4.472e-11 | |
| Glyma.05G130600 | hypothetical protein | AT1G30040:GA2OX2:gibberellin 2-oxidase | 1 | Chr05:32352085–32354865 (+) | 2.206e-12 | |
| Glyma.05G131200 | hypothetical protein | AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein | 1 | Chr05:32421116–32425198 (-) | 9.532e-13 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 2.481e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 4.811e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 4.166e-13 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 4.166e-13 | |
| Glyma.06G130900 | hypothetical protein | AT4G27800:TAP38:thylakoid-associated phosphatase 38 | 1 | Chr06:10753446–10757827 (+) | 7.147e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 9.542e-11 | |
| Glyma.07G068200 | hypothetical protein | AT4G00310:EDA8:Putative membrane lipoprotein | 1 | Chr07:6146155–6148036 (-) | 2.461e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.336e-13 | |
| Glyma.08G210200 | hypothetical protein | NA | 1 | Chr08:17010526–17012557 (+) | 2.269e-11 | |
| Glyma.08G210300 | hypothetical protein | NA | 1 | Chr08:17011623–17012548 (-) | 2.269e-11 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 8.486e-13 | |
| Glyma.08G300000 | hypothetical protein | NA | 1 | Chr08:41812728–41812868 (+) | 7.3e-11 | |
| Glyma.09G060200 | hypothetical protein | AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr09:5571201–5579976 (-) | 3e-11 | |
| Glyma.10G263800 | hypothetical protein | AT1G23010:LPR1:Cupredoxin superfamily protein | 1 | Chr10:48805999–48811533 (-) | 4.7e-12 | |
| Glyma.10G265400 | hypothetical protein | AT2G01290:RPI2: | 1 | Chr10:48921268–48922795 (+) | 7.778e-12 | |
| Glyma.11G037100 | hypothetical protein | AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr11:2678678–2681764 (-) | 8.096e-12 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 2.501e-14 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.086e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 1.086e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 1.086e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 6.926e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 6.66e-11 | |
| Glyma.14G171200 | hypothetical protein | AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein | 1 | Chr14:42387905–42389129 (+) | 7.492e-11 | |
| Glyma.14G190100 | hypothetical protein | AT2G04280:AT2G04280:calcium ion-binding protein | 1 | Chr14:45502008–45504459 (+) | 5.334e-11 | |
| Glyma.14G201800 | hypothetical protein | AT5G58390:AT5G58390:Peroxidase superfamily protein | 1 | Chr14:46728613–46733836 (+) | 1.895e-11 | |
| Glyma.14G202400 | hypothetical protein | AT1G21480:AT1G21480:Exostosin family protein | 1 | Chr14:46768802–46772377 (+) | 7.945e-11 | |
| Glyma.14G202500 | hypothetical protein | NA | 1 | Chr14:46773824–46775761 (+) | 7.945e-11 | |
| Glyma.14G204400 | hypothetical protein | AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 | 1 | Chr14:46936057–46943868 (-) | 1.06e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 7.207e-12 | |
| Glyma.15G256300 | hypothetical protein | NA | 1 | Chr15:48546007–48547401 (-) | 7.179e-17 | |
| Glyma.15G257100 | hypothetical protein | AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein | 1 | Chr15:48661607–48665946 (-) | 9.818e-11 | |
| Glyma.15G257500 | hypothetical protein | NA | 1 | Chr15:48713244–48717192 (+) | 1.5e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 2.07e-12 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 1.265e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 2.587e-12 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 9.187e-11 | |
| Glyma.16G158300 | hypothetical protein | AT5G43140:AT5G43140:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | 1 | Chr16:31859405–31862567 (+) | 5.842e-13 | |
| Glyma.16G158400 | hypothetical protein | AT5G48100:TT10:Laccase/Diphenol oxidase family protein | 1 | Chr16:31863760–31867327 (-) | 5.842e-13 | |
| Glyma.16G159100 | hypothetical protein | NA | 1 | Chr16:31889835–31894662 (+) | 4.11e-12 | |
| Glyma.16G161000 | hypothetical protein | NA | 1 | Chr16:32027849–32031609 (-) | 5.669e-12 | |
| Glyma.16G189000 | hypothetical protein | NA | 1 | Chr16:35160485–35167548 (-) | 3.558e-12 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 1.664e-11 | |
| Glyma.16G189200 | hypothetical protein | AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein | 1 | Chr16:35177846–35179798 (+) | 2.688e-12 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 2.382e-11 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 6.604e-12 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 8.84e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 8.84e-11 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 3.769e-11 |