SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G064300

Description hypothetical protein

Gene interval Chr11:4849799–4851673 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G36780:BEH2:BES1/BZR1 homolog 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1116Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0036.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1116 matching features · page 14 of 112

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06761 Carthamoside B4 506.1973 17.954e-13
P06768 Glycine,Cyclothialidine D 597.1728 11.868e-12
P06787 4,1-Benzoxazepine 145.0505 11.083e-14
P06850 Hydroxyzine 374.1755 14.307e-11
P06858 10-Methyl-9-(10-methyl-1H-acridin-9-yl)-1H-acridine 388.1925 18.247e-12
P06915 No candidate annotation 682.1883 19.193e-13
P06981 No candidate annotation 135.0636 16.436e-13
P07008 (2S,5R)-3,3-Dimethyl-2-(2-phenylethyl)-4-thia-1-azabicyclo[3.2.0]heptan-7-one 261.1177 16.279e-11
P07094 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0620 11.5e-13
P07122 p-Coumaroyl-malic acid 280.0568 11.474e-11