SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G064300

Description hypothetical protein

Gene interval Chr11:4849799–4851673 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G36780:BEH2:BES1/BZR1 homolog 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1116Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0036.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1116 matching features · page 108 of 112

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52604 No candidate annotation 388.2732 15.731e-13
P52690 DG(2:0/0:0/18:3(9,11,15)-OH(13)) 410.2662 12.661e-11
P52792 Pegvaliase 318.2154 14.478e-11
P52796 Famprofazone 377.2443 11.599e-12
P52891 Latrunculin C 397.1970 12.478e-12
P52965 No candidate annotation 254.2379 13.13e-13
P53070 5-Methyl-4-hydroxy-3-farnesylcoumarin 380.2363 15.567e-13
P53123 Subamolide C 336.2622 11.955e-11
P53128 17-Hydroxypregnenolone sulfate 412.1929 11.877e-12
P53144 1-O-(2R-hydroxy-4Z-octadecenyl)-sn-glycerol 358.3055 12.514e-11