SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.11G064300

Description hypothetical protein

Gene interval Chr11:4849799–4851673 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G36780:BEH2:BES1/BZR1 homolog 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1116Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0036.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1116 matching features · page 102 of 112

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P49167 DG(2:0/0:0/PGF1alpha) 472.2997 11.011e-12
P49244 (7E,12E,18R,20Z)-Variabilin 398.2446 15.283e-11
P49325 ZOLAZEPAM 286.1245 12.977e-11
P49333 3-Ethanoyloxy-phi,phi-Caroten 586.3811 11.839e-11
P49383 Alangiobussinine 354.1483 18.954e-12
P49400 No candidate annotation 471.7022 17.788e-15
P49511 FO 2546F 587.3618 14.914e-11
P49594 (+)-Mecambroline 295.1231 14.034e-11
P49643 Tributyl phosphate 266.1642 15.613e-12
P49665 Zingiberol 236.2116 11.361e-11