SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G264300

Description Mediator of RNA polymerase II transcription subunit 21

Gene interval Chr10:48858818–48862498 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G04780:MED21:mediator 21

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features122Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

122 matching features · page 10 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42729 1-(6Z,9Z,12Z-octadecatrienoyl)-2-(5Z,8Z,11Z,14Z,17Z-eicosapentaenoyl)-glycero-3-phospho-(1'-myo-inositol) 878.4971 14.501e-11
P43018 No candidate annotation 582.3881 17.056e-12
P43022 No candidate annotation 963.0209 14.916e-12
P43305 25S-3-O-(beta-D-xylopyranosyl)-26-O-(beta-D-xylopyranosyl)-cholesta-4,24(28)-diene-3 beta,6beta,8,15alpha,16beta,26-hexaol 726.4169 16.241e-12
P43405 Scutebarbatine H 469.2041 16.038e-14
P44001 No candidate annotation 839.4221 11.374e-11
P44266 Tylosin B 771.4372 16.453e-11
P44427 Pulchellamine C 479.2178 14.059e-11
P44457 Montanastatin 740.4230 11.636e-12
P44943 Asparagoside C 740.4321 13.108e-12