Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43305

Metabolite ID
P43305
Deionized mass
726.4169 Da
Average m/z
727.4250
Average RT
21.9809
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
94
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

94 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G002800 hypothetical protein AT4G24290:AT4G24290:MAC/Perforin domain-containing protein 4Chr16:144387–154780 (+)2.324e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)4.92e-12
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)7.736e-12
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 2Chr10:48805999–48811533 (-)8.901e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)4.319e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.182e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.182e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)7.038e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.602e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)2.407e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)6.664e-14
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)4.308e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)2.269e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.308e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)3.193e-11
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)3.198e-14
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)1.062e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.774e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.315e-14
Glyma.03G022500 hypothetical protein NA 1Chr03:2339702–2345448 (+)7.666e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.086e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.261e-13
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)8.293e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.919e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.709e-21
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.691e-16
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)1.881e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.962e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.962e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.071e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)9.247e-12
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 1Chr06:11083841–11088991 (+)6.278e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)1.055e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)1.76e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)2.94e-12
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)1.051e-12
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)1.051e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.226e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)4.613e-11
Glyma.10G264300 Mediator of RNA polymerase II transcription subunit 21 AT4G04780:MED21:mediator 21 1Chr10:48858818–48862498 (-)6.241e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)3.76e-13
Glyma.10G266400 hypothetical protein NA 1Chr10:48984735–48993690 (+)2.858e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.604e-12
Glyma.11G238100 hypothetical protein AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:33261569–33264662 (+)3.092e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)1.735e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.343e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.762e-12
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 1Chr12:38789187–38797498 (+)5.855e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.304e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)4.92e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.182e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.182e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.924e-11
Glyma.13G187100 hypothetical protein AT1G02100:SBI1:Leucine carboxyl methyltransferase 1Chr13:30076949–30095359 (-)6.054e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)3.371e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.398e-14
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.384e-20
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.602e-11
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)1.787e-14
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.748e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.767e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.748e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.748e-11
Glyma.15G172900 hypothetical protein AT5G57070:AT5G57070:hydroxyproline-rich glycoprotein family protein 1Chr15:15847563–15849835 (+)3.469e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)4.221e-12
Glyma.16G003100 hypothetical protein AT1G09800:AT1G09800:Pseudouridine synthase family protein 1Chr16:169457–172345 (-)2.324e-11
Glyma.16G003300 hypothetical protein AT5G49960:AT5G49960:ion channel protein 1Chr16:183599–192001 (+)6.332e-11
Glyma.16G003500 GLYI-22 putative lactoylglutathione lyase NA 1Chr16:194687–196274 (-)4.347e-11
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)2.394e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.933e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.367e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.469e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.278e-16
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)1.907e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.909e-13
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)8.312e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)4.234e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.497e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.008e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.839e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.839e-11
Glyma.17G144400 hypothetical protein NA 1Chr17:11801158–11803913 (+)8.122e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)2.495e-11
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)1.901e-11
Glyma.18G230600 hypothetical protein AT3G61250:MYB17:myb domain protein 17 1Chr18:51934101–51937216 (-)6.872e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)3.925e-14
Glyma.18G231300 hypothetical protein AT3G61310:AT3G61310:AT hook motif DNA-binding family protein 1Chr18:51979095–51987062 (-)6.595e-11
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)2.328e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)4.746e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)4.522e-14
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)2.935e-12
Glyma.19G032500 hypothetical protein NA 1Chr19:4140729–4141955 (-)1.153e-12
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)5.457e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.164e-13