SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 186 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52469 1-nonadecene-2,3R-dicarboxylic acid 354.2722 11.044e-13
P52488 Lignosulfonic acid 490.0985 14.176e-17
P52519 Glyinflanin J 390.1798 11.291e-11
P52536 3-Hydroxyisorenieratene 544.3713 11.689e-11
P52537 Mycotoxin T 2 341.1479 12.159e-11
P52703 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0977 12.027e-11
P52734 Bialaphos 323.1245 18.691e-12
P52796 Famprofazone 377.2443 12.048e-13
P52806 Matteuorienate C 588.1799 18.064e-12
P52832 No candidate annotation 555.4304 11.035e-12