SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 18 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05120 (Z,E,E,E)-5-(2,4,6-Tetradecatriene-8,10-diynylidene)-2(5H)-furanone 264.1146 14.875e-12
P05139 No candidate annotation 310.6259 19.534e-13
P05167 Leucyl-Glycine 188.1145 12.613e-11
P05182 5a,11a-Dehydrooxytetracycline 458.1309 11.794e-12
P05212 No candidate annotation 368.6134 17.996e-11
P05242 2(3H)-Furanone 84.0213 14.295e-11
P05350 Methylinoscavin B 450.1344 12.183e-14
P05414 Cyclocanaliculatin 360.0662 14.123e-11
P05421 Cycloclinacoside A1 298.0725 11.237e-12
P05479 Isopropyl 4-(1-(2-fluoro-4-(methylsulfonyl)phenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-yloxy)piperidine-1-carboxylate 477.1448 12.932e-11