Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05167

Metabolite ID
P05167
Deionized mass
188.1145 Da
Average m/z
189.1210
Average RT
8.6344
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
78
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

78 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)3.07e-16
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)7.172e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.143e-16
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.139e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)6.069e-13
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)7.183e-15
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)3.07e-16
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.119e-12
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)1.657e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)6.366e-12
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)9.934e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)9.934e-11
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 1Chr03:1370977–1375024 (+)5.793e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.005e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.651e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.166e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.814e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.677e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.975e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.331e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)8.566e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)7.151e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)4.116e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)3.933e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)8.739e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.41e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.802e-11
Glyma.08G296900 hypothetical protein NA 1Chr08:41297891–41301852 (+)4.99e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.456e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.148e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.319e-13
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.356e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.613e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.613e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.613e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.613e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.359e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.115e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.756e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.261e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.261e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.261e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.261e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)8.925e-16
Glyma.11G118200 hypothetical protein NA 1Chr11:8979431–8983783 (+)6.752e-12
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)5.034e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.244e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.244e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.335e-12
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.802e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.127e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.971e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.139e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.674e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.129e-11
Glyma.15G152400 hypothetical protein NA 1Chr15:12641790–12646649 (+)3.389e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)8.382e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.385e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.385e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)1.933e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.553e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.008e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)3.601e-11
Glyma.16G134500 hypothetical protein NA 1Chr16:29128092–29130458 (-)2.791e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.651e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.616e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.081e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.081e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)3.839e-12
Glyma.17G219300 hypothetical protein AT1G48270:GCR1:G-protein-coupled receptor 1 1Chr17:37088115–37094715 (+)7.253e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)3.49e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.178e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.178e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.178e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.227e-14
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)8.447e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)7.511e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.647e-11