SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 168 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46412 No candidate annotation 558.3395 16.82e-11
P46449 Rapisterone 508.3341 16.763e-11
P46478 2,5-Dihydroxypyridine 111.0316 19.021e-12
P46554 No candidate annotation 194.5818 11.993e-14
P46564 (2E,4E)-Pentadeca-2,4-dienoylcarnitine 381.2832 15.798e-11
P46569 7,2'-Bisdeacetoxyaustropicatine 637.3670 11.644e-11
P46590 Ambuic acid 350.1707 14.047e-11
P46610 Sarpogrelate 429.2126 14.697e-13
P46616 Scoparasin B 543.2428 12.728e-11
P46689 (+)-Buxanoldine 562.3785 11.778e-11