SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G078700

Description hypothetical protein

Gene interval Chr10:8882318–8903950 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1935Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1935 matching features · page 191 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54666 3-Caffeoyl-4-feruloylquinic acid 530.1391 17.232e-13
P54687 LysoPC(0:0/18:0) 523.3732 14.195e-11
P54708 No candidate annotation 1048.7381 12.56e-12
P54745 Notoginsenoside T2 666.4304 19.259e-11
P54754 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2692 16.092e-11
P54763 Cyromazine 166.0978 14.336e-14
P54773 (E)-Methyl-4-hydroxycinnamate 178.0625 12.769e-12
P54841 No candidate annotation 621.2360 11.188e-11
P54843 (9Z,12Z,15Z)-17-Hydroxyoctadeca-9,12,15-trienoylcarnitine 437.3105 13.586e-12
P54867 No candidate annotation 605.9887 19.618e-11