SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G038400

Description hypothetical protein

Gene interval Chr10:3400759–3409406 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features38Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records16

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4211.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

38 matching features · page 3 of 4

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P15533 A-D-Glucopyranoside,6-O-acetyl-1,3,4-tris-O-(2-methyl-1-oxopropyl)-B-D-fructofuranosyl, 6-acetate2,3,4-tris(2-methylpropanoate) 454.1669 16.493e-11
P16150 (6S,9R)-Vomifoliol 224.1399 15.53e-12
P18771 Veiutamine 293.1164 18.596e-11
P20514 Pentacarboxyl porphyrinogen III 700.2711 18.415e-11
P25172 Validamycin G 513.2035 15.578e-11
P25658 No candidate annotation 575.2729 13.009e-11
P26554 L-Alanyl-L-glutamate 218.0912 11.633e-11
P27077 No candidate annotation 655.3826 15.052e-11
P31000 Volutamide C 519.1092 15.766e-11
P31728 Vincristine 824.3989 16.862e-12