SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G028500

Description hypothetical protein

Gene interval Chr10:2476846–2478953 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features477Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

477 matching features · page 17 of 48

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P21004 No candidate annotation 631.2820 12.469e-11
P21063 3,4-Dihydro-7-methoxy-2-methylene-3-oxo-2H-1,4-benzoxazine-5-carboxylic acid 235.0478 12.025e-11
P21184 Malvidin-3-(p-coumaroyl)-rutinoside-5-glucoside 946.2929 11.262e-12
P21207 Dapriamicin A 511.1949 18.748e-12
P21325 (2-Naphthyl)methanol 158.0730 13.833e-12
P21336 Quercetin 3-(6''-ethylglucuronide) 506.1066 12.629e-11
P21485 Newbouldioside C 976.3055 11.886e-13
P21529 Hosloppin 392.0948 15.713e-13
P21706 dTDP-4-hydroxyamino-4,6-dideoxy-alpha-D-glucose 563.1008 11.234e-11
P21750 Vismiaguianone E 428.1608 13.745e-11