Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21325

Metabolite ID
P21325
Deionized mass
158.0730 Da
Average m/z
159.0813
Average RT
13.5395
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)2.623e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)3.175e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.175e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.722e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.722e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.722e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)3.005e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)5.898e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.916e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.916e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)5.769e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.124e-14
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)6.944e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.923e-13
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)4.961e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)4.961e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)4.961e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)8.791e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)8.793e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)8.793e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)8.793e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)8.793e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.007e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.496e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.102e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)3.339e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.175e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.175e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.175e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)5.638e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.792e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.226e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.206e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)7.769e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)8.954e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.722e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.722e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.722e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.722e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.722e-11
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)5.931e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)3.833e-12
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)3.833e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.005e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.565e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.565e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.565e-12
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)9.563e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)2.201e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)2.201e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)9.917e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.868e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.868e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.727e-12