Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21207

Metabolite ID
P21207
Deionized mass
511.1949 Da
Average m/z
512.2013
Average RT
13.5093
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
115
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

115 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)7.5e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)1.996e-14
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.91e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.818e-17
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 3Chr16:33322352–33330062 (+)8.023e-11
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)3.086e-12
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)1.923e-12
Glyma.07G107100 DHBK putative 3,4-dihydroxy-2-butanone kinase AT3G17770:AT3G17770:Dihydroxyacetone kinase 2Chr07:10447848–10456329 (+)7.061e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 2Chr10:2485817–2497071 (-)7.943e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)4.208e-15
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.789e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)2.671e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)8.488e-20
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.738e-11
Glyma.14G212500 hypothetical protein AT3G02850:SKOR:STELAR K+ outward rectifier 2Chr14:47758067–47768578 (-)3.252e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.663e-11
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)2.939e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)5.299e-11
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)4.265e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)3.532e-14
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)1.283e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)1.641e-17
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)1.641e-17
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.91e-13
Glyma.19G118900 hypothetical protein NA 2Chr19:37651114–37657346 (+)1.573e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)6.119e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.16e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.14e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)6.772e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.286e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)4.464e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.282e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.664e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.668e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.626e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.75e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.54e-14
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)4.675e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)4.675e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)4.675e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)6.306e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.466e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.466e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)3.01e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)9.226e-12
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)1.291e-14
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.056e-15
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.579e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.108e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2e-12
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.002e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.002e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.918e-12
Glyma.09G057000 hypothetical protein NA 1Chr09:5140625–5145658 (+)6.363e-11
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)2.009e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)1.658e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)9.89e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)2.541e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)1.204e-11
Glyma.09G065900 hypothetical protein NA 1Chr09:6419980–6421918 (+)2.797e-11
Glyma.09G066000 hypothetical protein NA 1Chr09:6431656–6439981 (-)2.797e-11
Glyma.09G066200 hypothetical protein AT5G57030:LUT2:Lycopene beta/epsilon cyclase protein 1Chr09:6475361–6486120 (+)2.797e-11
Glyma.09G066300 hypothetical protein AT2G19400:AT2G19400:AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 1Chr09:6487197–6498214 (-)5.924e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.506e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.632e-11
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)9.992e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)8.748e-12
Glyma.10G028600 hypothetical protein NA 1Chr10:2487313–2489838 (+)7.943e-13
Glyma.10G055100 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr10:5015329–5032990 (+)1.489e-11
Glyma.11G015300 hypothetical protein AT3G60500:CER7:3'-5'-exoribonuclease family protein 1Chr11:1048122–1055388 (+)7.053e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)2.747e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)2.747e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)2.747e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)6.989e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)2.544e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.939e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.939e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.087e-15
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.166e-11
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.013e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.671e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.068e-13
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.435e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.738e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.189e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.439e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)7.466e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)6.193e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)9.848e-15
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.475e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)2.92e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.02e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.57e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.996e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.337e-13
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)8.933e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.85e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.997e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)9.125e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)8.595e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)7.198e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)3.086e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.698e-16
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.698e-16
Glyma.17G199600 hypothetical protein AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family 1Chr17:31731965–31738073 (+)9.334e-12
Glyma.17G200400 hypothetical protein NA 1Chr17:31864566–31869426 (-)9.334e-12
Glyma.17G201000 hypothetical protein AT3G49600:UBP26:ubiquitin-specific protease 26 1Chr17:31946807–31956876 (-)9.334e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.579e-11
Glyma.17G219300 hypothetical protein AT1G48270:GCR1:G-protein-coupled receptor 1 1Chr17:37088115–37094715 (+)5.895e-11
Glyma.18G274100 hypothetical protein AT5G38880:AUG5:HAUS augmin-like complex subunit 1Chr18:55672621–55681964 (+)8.354e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)6.045e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.629e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.85e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.03e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)8.127e-12