SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G282900

Description hypothetical protein

Gene interval Chr09:49863377–49871270 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features1811Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records591

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.3263.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1811 matching features · page 152 of 182

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41012 Tylosin 915.5183 11.14e-11
P41115 No candidate annotation 491.7361 11.491e-12
P41145 1-(Benzofuran-5-yl)-N-Methylpropan-2-aMine 189.1141 11.843e-11
P41182 Lucyoside J 810.4356 16.977e-11
P41275 No candidate annotation 426.7072 13.456e-12
P41286 4-Hydroxytrideca-7,10-dienoylcarnitine 369.2541 15.912e-11
P41295 1,5-Heptadien-3-yne 92.0618 14.049e-11
P41379 11-Hydroxy-9-tridecenoic acid 228.1769 13.988e-11
P41383 5,6,7,8-Tetrahydro-5-isopropyl-3-methyl-2-naphthol 204.1496 19.606e-12
P41393 1-Mannosyloxy-3,4-didehydro-1,2-dihydro-8'-apo-psi-caroten-8'-ol 596.3702 17.063e-11