SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G276300

Alias WNK10

Description Not annotated

Gene interval Chr09:49161113–49166087 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G51630:WNK5:with no lysine (K) kinase 5

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features430Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0023.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

430 matching features · page 4 of 43

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P04575 2R,9R-dihydroxy-3S,4S,7S,8S-diepoxy-5E,10-undecadien-1-ol 228.0980 18.252e-11
P04584 2-Methylacetoacetic acid 116.0478 16.337e-14
P04841 4-Aminophenylacetic acid 151.0611 14.195e-13
P05035 No candidate annotation 350.0293 11.232e-12
P05074 Lithospermoside 329.1087 16.046e-11
P05139 No candidate annotation 310.6259 18.073e-11
P05287 6-Hydroxymethyl-7,8-dihydropterin diphosphate 355.0086 19.195e-12
P05577 Methyl syringate 212.0693 19.709e-11
P05722 (-)-Echinobetaine A 175.1198 17.812e-15
P05821 Pandangolide 3 362.1408 17.646e-11