SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G250000

Description hypothetical protein

Gene interval Chr09:47096937–47099390 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features443Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records21

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0474.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

443 matching features · page 35 of 45

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39524 No candidate annotation 637.2939 17.451e-11
P39654 1-Acetyl-3-carboxy-beta-carboline 254.0699 13.441e-13
P39708 Methyl N-({(2s,3s)-3-[(Propylamino)carbonyl]oxiran-2-Yl}carbonyl)-L-Isoleucyl-L-Prolinate 397.2207 11.57e-11
P39788 No candidate annotation 883.4670 11.228e-11
P39808 1-hexadecanoyl-2-(5-hydroxy-8-oxo-6E-octenoyl)-sn-glycero-3-phosphoethanolamine 607.3515 11.342e-13
P39839 No candidate annotation 223.1261 12.91e-11
P40128 O-Demethylpuromycin 457.2031 14.218e-11
P40383 Dimethylphysostigmine 289.1734 17.66e-12
P40439 LysoPC(18:3(6Z,9Z,12Z)/0:0) 517.3124 12.641e-11
P40497 Cannabisin E 642.2624 17.266e-11