SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G068800

Description hypothetical protein

Gene interval Chr09:6979166–6993110 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features354Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

354 matching features · page 28 of 36

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39403 Agathisflavone 538.0890 12.868e-11
P39700 Minutoside A 662.3230 11.243e-11
P39753 No candidate annotation 561.7489 14.461e-12
P39827 No candidate annotation 531.2999 18.995e-11
P40190 Tasumatrol F 632.2808 19.991e-11
P40215 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5413 11.907e-16
P40332 No candidate annotation 366.7200 15.373e-13
P40383 Dimethylphysostigmine 289.1734 13.601e-12
P40520 17alpha-Methylestradiol 286.1913 16.12e-11
P40626 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5541 13.808e-12