SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G068800

Description hypothetical protein

Gene interval Chr09:6979166–6993110 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features354Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

354 matching features · page 18 of 36

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24321 10R-(3,6-dideoxy-alpha-L-arabinosyloxy)-3R,8R-dihydroxy-undecanoic acid 364.2111 12.371e-11
P24382 beta-D-Galactopyranosyl-(1->4)-2-amino-2-deoxy-beta-D-glucopyranosyl-(1->6)-D-mannose 503.1864 15.343e-11
P24426 Hept-4-enedioylcarnitine 301.1540 12.022e-11
P24441 FR 235222 556.3195 11.844e-12
P24447 Codonopsinol 283.1463 14.497e-11
P24545 5-Methoxy-3,4-methylenedioxyamphetamine 209.1042 12.806e-12
P24680 (2S)-2-Hexylsulfanyl-N-[6-methyl-2,4-bis(methylsulfanyl)pyridin-3-yl]decanamide 470.2431 17.722e-11
P24923 Paracentrone 462.3127 11.247e-11
P25017 CDP-DG(20:1(11Z)/TXB2) 1121.5707 13.379e-14
P25031 Morinin I 524.3505 17.679e-11