SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G062900

Description hypothetical protein

Gene interval Chr09:6004419–6011041 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features548Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

548 matching features · page 5 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06122 No candidate annotation 769.2075 15.596e-12
P06434 Eupaglehnin F 400.1272 15.306e-12
P06840 13-Hydroxypalmatine 367.1410 13.255e-12
P06843 Leptanthin 286.0773 17.566e-12
P06857 2-Methylthioribosyl-trans-zeatin 397.1422 13.187e-12
P06881 No candidate annotation 697.2884 18.177e-13
P06900 5-Phenyl-1,3-oxazinane-2,4-dione 191.0561 11.869e-11
P06919 No candidate annotation 125.5465 11.226e-12
P06954 Benzonitrile, 3-amino-4-((2-((dimethylamino)methyl)phenyl)thio)- 283.1090 17.254e-12
P07083 Thioxanthen-9-one 212.0298 11.294e-11