SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G062900

Description hypothetical protein

Gene interval Chr09:6004419–6011041 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features548Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

548 matching features · page 43 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P43651 No candidate annotation 636.8294 13.042e-12
P44001 No candidate annotation 839.4221 17.221e-13
P44185 (9E)-Dodecenoylcarnitine 341.2519 11.706e-12
P44193 (+)-12alpha,28-Dihydroxy-3alpha-(3'-hydroxy-3'-methylglutaryloxy)-24-methyllanosta-8,24(31)-dien-26-oic acid 646.4036 15.805e-14
P44345 No candidate annotation 555.3355 14.96e-13
P44378 Malyngamide P 457.2574 13.156e-11
P44414 Wattoside H 688.3271 14.189e-11
P44472 Ganglioside GT1c (d18:1/16:0) 2099.0215 14.043e-11
P44476 Ccris 7799 1041.5175 17.071e-11
P44481 1-dodecanoyl-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 726.4307 16.763e-11