Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44345

Metabolite ID
P44345
Deionized mass
555.3355 Da
Average m/z
556.3415
Average RT
22.5753
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)8.601e-15
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 2Chr05:32021521–32025767 (-)2.277e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)2.883e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.521e-11
Glyma.08G220200 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 2Chr08:17889781–17898867 (+)3.278e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.275e-11
Glyma.20G218500 hypothetical protein AT4G10465:AT4G10465:Heavy metal transport/detoxification superfamily protein__AT2G18196:AT2G18196:Heavy metal transport… 2Chr20:45428471–45432099 (+)2.952e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)9.986e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.191e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.409e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.106e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.066e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.277e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.078e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.977e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.977e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.977e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)9.777e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.384e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.746e-17
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.464e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.464e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.521e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.521e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.521e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.575e-13
Glyma.08G219800 hypothetical protein NA 1Chr08:17863774–17864667 (-)5.784e-12
Glyma.08G219900 hypothetical protein AT1G80890:AT1G80890:GAG1At protein 1Chr08:17867478–17873695 (+)5.784e-12
Glyma.08G220000 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr08:17875817–17877391 (-)5.784e-12
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)4.96e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)8.879e-15
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)8.879e-15
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)8.879e-15
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)8.879e-15
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)9.004e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.953e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)9.82e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.643e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.643e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.936e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.936e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)4.538e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.268e-13
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)1.025e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)7.688e-11
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)8.409e-11
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 1Chr16:6914905–6920531 (+)8.434e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)6.689e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.689e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)2.913e-12
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)6.295e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)6.295e-11
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)4.629e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.129e-12
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)5.206e-11
Glyma.20G218700 hypothetical protein AT5G47520:RABA5a:RAB GTPase homolog A5A 1Chr20:45447355–45452750 (-)1.569e-11