SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 39 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10570 4'-hydroxytrazodone 387.1475 11.286e-12
P10610 Melithiazol I 436.1489 13.743e-12
P10689 1-(Pentafluorophenyl)propane 210.0480 16.356e-13
P10690 4,2',3',4'-Tetrahydroxychalcone 4'-O-(2''-O-p-coumaroyl-6''-O-acetyl)glucoside 622.1619 15.542e-13
P10726 Isothapsakin B 630.2587 15.186e-12
P10808 No candidate annotation 221.0416 15.159e-11
P10869 GMP-N-epsilon-(N-alpha-acetyl lysine methyl ester) 5'-phosphoramidate 547.1798 14.95e-17
P10879 Tetraphenylporphyrin 614.2479 16.453e-13
P10934 Asperuloide C 602.2568 12.8e-12
P11049 No candidate annotation 766.1077 15.67e-12