Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11049

Metabolite ID
P11049
Deionized mass
766.1077 Da
Average m/z
767.1214
Average RT
10.6428
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)1.154e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)5.705e-14
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)9.929e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)9.929e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)9.929e-11
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)1.168e-11
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)3.782e-12
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)5.203e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.991e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.991e-12
Glyma.02G109200 hypothetical protein AT1G14180:AT1G14180:RING/U-box superfamily protein 1Chr02:10483830–10487258 (-)1.952e-11
Glyma.02G109400 hypothetical protein NA 1Chr02:10495046–10497626 (-)3.808e-15
Glyma.02G109700 hypothetical protein NA 1Chr02:10518501–10523556 (+)3.434e-11
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 1Chr02:10547851–10557930 (+)3.808e-15
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)2.419e-14
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)6.402e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)6.327e-11
Glyma.09G056300 hypothetical protein NA 1Chr09:5059486–5068979 (+)3.619e-11
Glyma.09G056400 hypothetical protein NA 1Chr09:5080364–5088515 (-)4.466e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)5.67e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.256e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)2.193e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)9.929e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)9.929e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)9.929e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)9.929e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)9.929e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.836e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.836e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.958e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.123e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.028e-14
Glyma.14G076000 hypothetical protein AT5G42960:AT5G42960:outer envelope pore 24B-like protein 1Chr14:6371619–6375055 (+)6.276e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)2.179e-13
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)2.179e-13
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)2.179e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.526e-13
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 1Chr16:1208240–1214310 (-)1.923e-12
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 1Chr16:1222829–1228462 (-)1.923e-12
Glyma.16G018000 hypothetical protein NA 1Chr16:1601748–1607341 (-)1.486e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)1.141e-17
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.913e-15
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)1.397e-11
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)1.685e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)4.867e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.174e-14
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.174e-14
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)6.794e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)8.189e-11
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)1.835e-11
Glyma.19G201800 hypothetical protein NA 1Chr19:45885155–45889932 (-)5.88e-12