SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 38 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10273 5-Imino-2-methyl-1-cyclopenten-1-ol 111.0682 13.357e-11
P10332 Kahakamide A 378.1445 19.331e-11
P10365 4-Cresol 108.0576 17.67e-13
P10397 Navitoclax 973.3105 12.079e-12
P10441 Sudan black B 456.2063 18.206e-13
P10476 No candidate annotation 264.6079 19.21e-11
P10501 Cyamemazine 323.1472 12.726e-11
P10526 3,4,5-Trimethoxyphenyl acetate 226.0836 17.34e-13
P10534 Tetralin 132.0941 11.677e-13
P10537 Benzoporphyrin 360.1371 18.329e-14