SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 26 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05732 No candidate annotation 534.6800 16.201e-12
P05737 No candidate annotation 135.0653 18.202e-11
P05751 6-(alpha-D-Glucosaminyl)-1-phosphatidyl-1D-myo-inositol 551.1353 12.258e-11
P05765 Lycomarasmine B 277.0881 17.579e-12
P05770 1-Methylpiperidin-4-yl butanoate 185.1403 11.442e-11
P05821 Pandangolide 3 362.1408 11.453e-12
P05827 (2R)-2-Methylpyrrolidine-1-carboxylic acid 129.0771 18.303e-11
P05861 Ethenodeoxyadenosine 275.1027 11.082e-12
P05960 No candidate annotation 559.1606 12.714e-12
P05964 No candidate annotation 533.1910 13.367e-11