Overview Annotation GWAS Evidence Associated genes

P05732

Metabolite ID
P05732
Deionized mass
534.6800 Da
Average m/z
535.6892
Average RT
8.8167
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)2.579e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)7.861e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)4.699e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.991e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)6.201e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.484e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.429e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)8.212e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.254e-13
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.254e-13
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.583e-11
Glyma.20G009300 hypothetical protein NA 1Chr20:824176–827023 (+)4.941e-12
Glyma.20G217500 hypothetical protein AT5G41950:AT5G41950:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:45312584–45322950 (-)4.112e-12